STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSXCOP00000025238Ubiquitin carboxyl-terminal hydrolase. (398 aa)    
Predicted Functional Partners:
rnf41
Ring finger protein 41.
    
 0.831
LOC114138068
Ribosomal protein S27a.
    
 0.780
Hgs
Hepatocyte growth factor-regulated tyrosine kinase substrate.
   
 0.763
LOC114147918
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2.
    
 0.731
ENSXCOP00000021881
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 1.
    
 0.731
ENSXCOP00000019983
Receptor (TNFRSF)-interacting serine-threonine kinase 1, like.
    
 0.705
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
 0.685
LOC114149001
Ubiquitin-like domain-containing protein.
   
 0.685
Otub1
OTU deubiquitinase, ubiquitin aldehyde binding 1b.
    
 0.595
ENSXCOP00000024924
Ubiquitin specific peptidase 28; Belongs to the peptidase C19 family.
   
 
 0.591
Your Current Organism:
Xiphophorus couchianus
NCBI taxonomy Id: 32473
Other names: Limia couchiana, Monterrey platyfish, X. couchianus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.