STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ift172Intraflagellar transport 172. (1713 aa)    
Predicted Functional Partners:
Ift57
Intraflagellar transport 57 homolog (Chlamydomonas).
   
 0.991
ENSXCOP00000016515
Intraflagellar transport 80 homolog (Chlamydomonas).
   
0.989
ENSXCOP00000011680
Intraflagellar transport 81 homolog.
    
 0.986
ENSXCOP00000024534
Intraflagellar transport 88 homolog.
   
 0.986
ENSXCOP00000004696
Uncharacterized protein.
    
 0.984
ENSXCOP00000024500
Fleer.
   
 0.984
ENSXCOP00000020296
Uncharacterized protein.
   
 0.980
Ift52
Intraflagellar transport 52 homolog (Chlamydomonas).
    
 0.979
Ttc26
Tetratricopeptide repeat domain 26.
    
 0.978
ENSXCOP00000004003
Choline dehydrogenase.
    
 0.949
Your Current Organism:
Xiphophorus couchianus
NCBI taxonomy Id: 32473
Other names: Limia couchiana, Monterrey platyfish, X. couchianus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.