STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSXCOP00000026921Uncharacterized protein. (153 aa)    
Predicted Functional Partners:
syce3
Uncharacterized protein.
    
 0.831
sycp3
Synaptonemal complex protein 3.
     
 0.704
ENSXCOP00000002646
Zebrafish testis-expressed 38.
      
 0.636
ENSXCOP00000019487
Structural maintenance of chromosomes protein.
   
 
 0.562
Spo11
SPO11 initiator of meiotic double stranded breaks.
      
 0.558
ENSXCOP00000025822
Uncharacterized protein.
      
 0.531
ENSXCOP00000025313
Cell division cycle associated 5.
      
 0.516
ENSXCOP00000019044
Rad21_Rec8_N domain-containing protein.
     
 0.482
ENSXCOP00000026113
RAD21 cohesin complex component b.
     
 0.482
Xrcc2
RECA_2 domain-containing protein.
      
 0.479
Your Current Organism:
Xiphophorus couchianus
NCBI taxonomy Id: 32473
Other names: Limia couchiana, Monterrey platyfish, X. couchianus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.