STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSXCOP00000027073Uncharacterized protein. (131 aa)    
Predicted Functional Partners:
Elp3
Elongator acetyltransferase complex subunit 3.
   
 
 0.762
ENSXCOP00000020746
Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family.
    
 
 0.692
Sgce
Sarcoglycan, epsilon.
     
 0.651
ENSXCOP00000005166
Sarcoglycan, alpha.
     
 0.651
ENSXCOP00000012872
NIN1 (RPN12) binding protein 1 homolog.
   
    0.558
ENSXCOP00000003204
Uncharacterized protein.
     
 0.521
Sars2
Seryl-tRNA synthetase 2, mitochondrial.
     
 0.521
ENSXCOP00000006454
Zgc:110591.
     
 0.521
ENSXCOP00000008041
Seryl-tRNA synthetase.
     
 0.521
Elp4
Elongator acetyltransferase complex subunit 4.
   
 
 0.504
Your Current Organism:
Xiphophorus couchianus
NCBI taxonomy Id: 32473
Other names: Limia couchiana, Monterrey platyfish, X. couchianus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.