STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSXCOP00000027191ETS domain-containing protein. (438 aa)    
Predicted Functional Partners:
ENSXCOP00000010457
COP1 E3 ubiquitin ligase.
    
 
 0.575
Det1
DET1 partner of COP1 E3 ubiquitin ligase.
    
 
 0.570
stk40
Serine/threonine kinase 40.
   
   0.550
KCNN1
CaMBD domain-containing protein.
   
  
 0.421
KCNN2
Potassium calcium-activated channel subfamily N member 2.
   
  
 0.421
ENSXCOP00000009425
Potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1a.
   
  
 0.421
ENSXCOP00000026154
CaMBD domain-containing protein.
   
  
 0.421
ENSXCOP00000005367
Potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4.
   
  
 0.416
Runx3
Runt-related transcription factor.
   
 0.410
Runx2
Runt-related transcription factor.
   
 0.410
Your Current Organism:
Xiphophorus couchianus
NCBI taxonomy Id: 32473
Other names: Limia couchiana, Monterrey platyfish, X. couchianus
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