STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSXCOP00000027210Uncharacterized protein. (562 aa)    
Predicted Functional Partners:
CD9
Tetraspanin.
    
 
 0.777
LOC114159921
Tetraspanin.
    
 
 0.777
Cd81
Tetraspanin.
    
 
 0.747
ENSXCOP00000022471
CD81 molecule b; Belongs to the tetraspanin (TM4SF) family.
    
 
 0.747
ENSXCOP00000027066
Tetraspanin.
    
 
 0.564
Gdap2
Ganglioside induced differentiation associated protein 2.
      
 0.532
ENSXCOP00000008911
Family with sequence similarity 160 member B1.
      
 0.518
ptgfr
Prostaglandin F receptor (FP).
      
 0.516
Nr4a3
Nuclear receptor subfamily 4, group A, member 3.
      
 0.491
LOC114160673
Cyclin-dependent kinase inhibitor 1D.
      
 0.485
Your Current Organism:
Xiphophorus couchianus
NCBI taxonomy Id: 32473
Other names: Limia couchiana, Monterrey platyfish, X. couchianus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.