Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LGAS_0109Sodium/proton antiporter, CPA1 family; TC 2.A.36. (523 aa)    
Predicted Functional Partners:
LGAS_0162
Transporter, CPA2 family; TC 2.A.37; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
   
 
 0.647
LGAS_1162
Hypothetical protein.
  
     0.556
LGAS_0110
Predicted multitransmembrane protein.
       0.542
LGAS_1637
Predicted membrane protein.
 
     0.511
LGAS_0111
Predicted multitransmembrane protein.
       0.498
LGAS_0112
Esterase/lipase.
       0.480
LGAS_1762
Alpha/beta superfamily hydrolase.
 
     0.471
LGAS_1827
Sodium/proton antiporter NapA, CPA2 family; TC 2.A.37.2.1.
   
 
 0.466
LGAS_0535
PTS system beta-glucoside-specific EIIBCA component family protein; TC 4.A.1; TC 4.A.1; TC 4.A.1.
 
   
 0.406
Your Current Organism:
Lactobacillus gasseri
NCBI taxonomy Id: 324831
Other names: L. gasseri ATCC 33323 = JCM 1131, Lactobacillus gasseri ATCC 33323, Lactobacillus gasseri ATCC 33323 = JCM 1131, Lactobacillus gasseri DSM 20243, Lactobacillus gasseri NCDO 2233
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