Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LGAS_0117Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB. (162 aa)    
Predicted Functional Partners:
LGAS_0120
Phosphotransferase system, mannose/fructose-specific component IIA.
 
  
 0.989
LGAS_0119
PTS system IID component, Man family; TC 4.A.6.
 
 
 0.982
LGAS_0118
Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC.
 
 
 0.981
LGAS_0516
PTS system IID component, Man family; TC 4.A.6.
 
 
 0.929
LGAS_0515
Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC.
 
 
 0.927
LGAS_1793
PTS system IID component, Man family; TC 4.A.6.
 
 
 0.923
LGAS_1794
Mannose-specific PTS system component IIC.
 
 
 0.875
LGAS_0115
Galactosamine 6-phosphate isomerase AgaS.
 
  
 0.722
LGAS_0517
Phosphotransferase system, mannose/fructose-specific component IIA.
 
  
 0.650
LGAS_1795
Phosphotransferase system, mannose/fructose-specific component IIA.
 
  
0.610
Your Current Organism:
Lactobacillus gasseri
NCBI taxonomy Id: 324831
Other names: L. gasseri ATCC 33323 = JCM 1131, Lactobacillus gasseri ATCC 33323, Lactobacillus gasseri ATCC 33323 = JCM 1131, Lactobacillus gasseri DSM 20243, Lactobacillus gasseri NCDO 2233
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