Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LGAS_0147Transcriptional regulator. (263 aa)    
Predicted Functional Partners:
LGAS_0149
PTS system fructose-specific EIIABC component family protein; TC 4.A.2.1.8; TC 4.A.2.1.8; TC 4.A.2.1.8.
 
   
 0.811
LGAS_1686
Transcriptional regulator, RpiR family.
  
     0.757
LGAS_1541
Transcriptional regulator.
  
     0.742
LGAS_1770
Transcriptional regulator, RpiR family.
  
     0.730
LGAS_0148
Fructose-1-phosphate kinase related fructose-6-phosphate kinase (PfkB); Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
 
     0.682
LGAS_0016
Hypothetical protein.
  
     0.532
LGAS_0398
PTS system sucrose-specific IIBC component; TC 4.A.1.2.12; TC 4.A.1.2.12; TC 4.A.1.2.12.
  
  
 0.456
LGAS_0535
PTS system beta-glucoside-specific EIIBCA component family protein; TC 4.A.1; TC 4.A.1; TC 4.A.1.
  
  
 0.456
LGAS_1669
Phosphotransferase system, EIIC; TC 4.A.1.2.6; TC 4.A.1.2.6; TC 4.A.1.2.6.
  
  
 0.456
LGAS_1755
PTS system, beta-glucoside-specific, IIABC component; TC 4.A.1.2.5; TC 4.A.1.2.5; TC 4.A.1.2.5.
  
  
 0.456
Your Current Organism:
Lactobacillus gasseri
NCBI taxonomy Id: 324831
Other names: L. gasseri ATCC 33323 = JCM 1131, Lactobacillus gasseri ATCC 33323, Lactobacillus gasseri ATCC 33323 = JCM 1131, Lactobacillus gasseri DSM 20243, Lactobacillus gasseri NCDO 2233
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