Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LGAS_0186Hypothetical protein. (193 aa)    
Predicted Functional Partners:
celB
Cellobiose-specific PTS system IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
 
    0.944
LGAS_0185
Beta-glucosidase/6-phospho-beta- glucosidase/beta-galactosidase; Belongs to the glycosyl hydrolase 1 family.
  
    0.635
LGAS_0501
Putative PTS system, lactose-specific IIC component; TC 4.A.3.1.1; TC 4.A.3.1.1.
 
    0.544
LGAS_0476
Bacteriocin helveticin.
  
     0.533
LGAS_0195
Cellobiose-specific PTS system IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
 
    0.521
LGAS_0188
Transcriptional regulator, GntR family.
       0.514
LGAS_1769
Beta-lactamase class A.
  
     0.495
LGAS_0343
Putative PTS system, lactose-specific IIC component; TC 4.A.3.1.1; TC 4.A.3.1.1.
  
    0.471
LGAS_0194
Cellobiose-specific PTS system IIB component.
 
    0.414
Your Current Organism:
Lactobacillus gasseri
NCBI taxonomy Id: 324831
Other names: L. gasseri ATCC 33323 = JCM 1131, Lactobacillus gasseri ATCC 33323, Lactobacillus gasseri ATCC 33323 = JCM 1131, Lactobacillus gasseri DSM 20243, Lactobacillus gasseri NCDO 2233
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