Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LGAS_0342PTS system lactose-specific IIA component, Lac family; TC 4.A.3.1.1. (119 aa)    
Predicted Functional Partners:
LGAS_0343
Putative PTS system, lactose-specific IIC component; TC 4.A.3.1.1; TC 4.A.3.1.1.
 
 0.999
LGAS_0501
Putative PTS system, lactose-specific IIC component; TC 4.A.3.1.1; TC 4.A.3.1.1.
 
 0.997
LGAS_0344
6-phospho-beta-galactosidase.
 
 
 0.983
LGAS_0194
Cellobiose-specific PTS system IIB component.
 
 
 0.945
LGAS_0502
6-phospho-beta-galactosidase.
 
 
 0.943
LGAS_1361
Phosphotransferase system, HPr-related protein.
   
 0.937
LGAS_0500
Cellobiose-specific PTS system IIA component.
  
  
 
0.904
LGAS_1851
Cellobiose-specific PTS system IIC component.
 
  
 0.859
LGAS_1676
Cellobiose-specific PTS system IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
 
  
 0.853
LGAS_0570
Cellobiose-specific PTS system IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
 
  
 0.852
Your Current Organism:
Lactobacillus gasseri
NCBI taxonomy Id: 324831
Other names: L. gasseri ATCC 33323 = JCM 1131, Lactobacillus gasseri ATCC 33323, Lactobacillus gasseri ATCC 33323 = JCM 1131, Lactobacillus gasseri DSM 20243, Lactobacillus gasseri NCDO 2233
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