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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
LGAS_0352Geranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family. (338 aa)    
Predicted Functional Partners:
LGAS_1845
1,4-dihydroxy-2-naphthoate octaprenyltransferase.
 
   
 0.880
menG
Demethylmenaquinone methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2).
 
 
 0.867
LGAS_1844
Cytochrome bd biosynthesis ABC-type transporter, ATPase and permease component.
  
     0.716
LGAS_1843
Cytochrome bd biosynthesis ABC-type transporter, ATPase and permease component.
  
     0.660
LGAS_1137
Predicted transcriptional regulator.
  
 
 0.643
LGAS_0350
1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.
  
  
 0.623
fni
Isopentenyl diphosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).
 
  
 0.546
LGAS_1034
Diphosphomevalonate decarboxylase.
  
 
 0.544
LGAS_0351
Permease of the major facilitator superfamily.
       0.532
xseB
Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.
  
  
 0.488
Your Current Organism:
Lactobacillus gasseri
NCBI taxonomy Id: 324831
Other names: L. gasseri ATCC 33323 = JCM 1131, Lactobacillus gasseri ATCC 33323, Lactobacillus gasseri ATCC 33323 = JCM 1131, Lactobacillus gasseri DSM 20243, Lactobacillus gasseri NCDO 2233
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