STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LGAS_0358Amino acid ABC transporter membrane protein, PAAT family; TC 3.A.1.3.-. (217 aa)    
Predicted Functional Partners:
LGAS_0360
Amino acid ABC transporter substrate-binding protein, PAAT family; TC 3.A.1.3.-; Belongs to the bacterial solute-binding protein 3 family.
 0.999
LGAS_0359
Amino acid ABC transporter ATP-binding protein, PAAT family; TC 3.A.1.3.-.
 
 0.998
LGAS_0085
Amino acid ABC transporter ATP-binding protein, PAAT family; TC 3.A.1.3.-.
 
 0.992
LGAS_0528
Amino acid ABC transporter ATP-binding protein, PAAT family; TC 3.A.1.3.-.
 
 0.992
LGAS_0545
Amino acid ABC transporter ATP-binding protein, PAAT family; TC 3.A.1.3.-.
 
 0.992
LGAS_0527
Amino acid ABC transporter substrate-binding protein, PAAT family; TC 3.A.1.3.-.
 
 0.874
LGAS_1081
ABC-type antimicrobial peptide transport system, ATPase component.
 
  
 0.803
phnC
ABC-type phosphate/phosphonate transport system, ATPase component; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
      0.775
metN
ABC-type metal ion transport system, ATPase component; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
    
 0.770
LGAS_0529
Amino acid ABC transporter substrate-binding protein, PAAT family; TC 3.A.1.3.-.
 
 0.735
Your Current Organism:
Lactobacillus gasseri
NCBI taxonomy Id: 324831
Other names: L. gasseri ATCC 33323 = JCM 1131, Lactobacillus gasseri ATCC 33323, Lactobacillus gasseri ATCC 33323 = JCM 1131, Lactobacillus gasseri DSM 20243, Lactobacillus gasseri NCDO 2233
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