LGAS_0496 protein (Lactobacillus gasseri) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

LGAS_0496

PTS system IIB component, Gat family; TC 4.A.5. (120 aa)

Predicted Functional Partners:

LGAS_0495

0.993

LGAS_0497

0.990

LGAS_0125

0.973

LGAS_1361

0.911

LGAS_0494

0.782

lacB

0.763

lacA

0.735

LGAS_0149

0.726

LGAS_1726

0.726

LGAS_0498

0.614

Your Current Organism:

Lactobacillus gasseri

NCBI taxonomy Id: 324831
Other names: L. gasseri ATCC 33323 = JCM 1131, Lactobacillus gasseri ATCC 33323, Lactobacillus gasseri ATCC 33323 = JCM 1131, Lactobacillus gasseri DSM 20243, Lactobacillus gasseri NCDO 2233

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LGAS_0125	LGAS_0149	LGAS_0125	LGAS_0149	PTS system IIA component, Gat family; TC 4.A.5.	PTS system fructose-specific EIIABC component family protein; TC 4.A.2.1.8; TC 4.A.2.1.8; TC 4.A.2.1.8.	0.635
LGAS_0125	LGAS_0494	LGAS_0125	LGAS_0494	PTS system IIA component, Gat family; TC 4.A.5.	Hypothetical protein.	0.439
LGAS_0125	LGAS_0495	LGAS_0125	LGAS_0495	PTS system IIA component, Gat family; TC 4.A.5.	PTS system IIA component, Gat family; TC 4.A.5.	0.904
LGAS_0125	LGAS_0496	LGAS_0125	LGAS_0496	PTS system IIA component, Gat family; TC 4.A.5.	PTS system IIB component, Gat family; TC 4.A.5.	0.973
LGAS_0125	LGAS_0497	LGAS_0125	LGAS_0497	PTS system IIA component, Gat family; TC 4.A.5.	PTS system IIC component, Gat family; TC 4.A.5.	0.972
LGAS_0125	LGAS_1361	LGAS_0125	LGAS_1361	PTS system IIA component, Gat family; TC 4.A.5.	Phosphotransferase system, HPr-related protein.	0.920
LGAS_0125	LGAS_1726	LGAS_0125	LGAS_1726	PTS system IIA component, Gat family; TC 4.A.5.	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; TC 4.A.2.1.4; TC 4.A.2.1.4; TC 4.A.2.1.4.	0.575
LGAS_0149	LGAS_0125	LGAS_0149	LGAS_0125	PTS system fructose-specific EIIABC component family protein; TC 4.A.2.1.8; TC 4.A.2.1.8; TC 4.A.2.1.8.	PTS system IIA component, Gat family; TC 4.A.5.	0.635
LGAS_0149	LGAS_0495	LGAS_0149	LGAS_0495	PTS system fructose-specific EIIABC component family protein; TC 4.A.2.1.8; TC 4.A.2.1.8; TC 4.A.2.1.8.	PTS system IIA component, Gat family; TC 4.A.5.	0.629
LGAS_0149	LGAS_0496	LGAS_0149	LGAS_0496	PTS system fructose-specific EIIABC component family protein; TC 4.A.2.1.8; TC 4.A.2.1.8; TC 4.A.2.1.8.	PTS system IIB component, Gat family; TC 4.A.5.	0.726
LGAS_0149	LGAS_0497	LGAS_0149	LGAS_0497	PTS system fructose-specific EIIABC component family protein; TC 4.A.2.1.8; TC 4.A.2.1.8; TC 4.A.2.1.8.	PTS system IIC component, Gat family; TC 4.A.5.	0.550
LGAS_0149	LGAS_1361	LGAS_0149	LGAS_1361	PTS system fructose-specific EIIABC component family protein; TC 4.A.2.1.8; TC 4.A.2.1.8; TC 4.A.2.1.8.	Phosphotransferase system, HPr-related protein.	0.895
LGAS_0149	LGAS_1726	LGAS_0149	LGAS_1726	PTS system fructose-specific EIIABC component family protein; TC 4.A.2.1.8; TC 4.A.2.1.8; TC 4.A.2.1.8.	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; TC 4.A.2.1.4; TC 4.A.2.1.4; TC 4.A.2.1.4.	0.928
LGAS_0149	lacA	LGAS_0149	LGAS_0492	PTS system fructose-specific EIIABC component family protein; TC 4.A.2.1.8; TC 4.A.2.1.8; TC 4.A.2.1.8.	Galactose-6-phosphate isomerase lacA subunit.	0.415
LGAS_0149	lacB	LGAS_0149	LGAS_0493	PTS system fructose-specific EIIABC component family protein; TC 4.A.2.1.8; TC 4.A.2.1.8; TC 4.A.2.1.8.	Galactose-6-phosphate isomerase lacB subunit.	0.415
LGAS_0494	LGAS_0125	LGAS_0494	LGAS_0125	Hypothetical protein.	PTS system IIA component, Gat family; TC 4.A.5.	0.439
LGAS_0494	LGAS_0495	LGAS_0494	LGAS_0495	Hypothetical protein.	PTS system IIA component, Gat family; TC 4.A.5.	0.673
LGAS_0494	LGAS_0496	LGAS_0494	LGAS_0496	Hypothetical protein.	PTS system IIB component, Gat family; TC 4.A.5.	0.782
LGAS_0494	LGAS_0497	LGAS_0494	LGAS_0497	Hypothetical protein.	PTS system IIC component, Gat family; TC 4.A.5.	0.704
LGAS_0494	lacA	LGAS_0494	LGAS_0492	Hypothetical protein.	Galactose-6-phosphate isomerase lacA subunit.	0.790

page 1 of 5

Server load: low (36%) [HD]

Permalink

Network

Neighborhood

Experiments

Co-occurrence

Databases

Co-expression

Textmining

Fusion

© STRING Consortium 2026

Credits

Access

Info

About