STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LGAS_05026-phospho-beta-galactosidase. (475 aa)    
Predicted Functional Partners:
LGAS_0501
Putative PTS system, lactose-specific IIC component; TC 4.A.3.1.1; TC 4.A.3.1.1.
 
 
 0.994
LGAS_0343
Putative PTS system, lactose-specific IIC component; TC 4.A.3.1.1; TC 4.A.3.1.1.
 
 
 0.979
LGAS_0500
Cellobiose-specific PTS system IIA component.
 
 
 0.975
LGAS_0342
PTS system lactose-specific IIA component, Lac family; TC 4.A.3.1.1.
 
 
 0.943
lacB
Galactose-6-phosphate isomerase lacB subunit.
  
 
 0.935
lacA
Galactose-6-phosphate isomerase lacA subunit.
  
 
 0.932
LGAS_0344
6-phospho-beta-galactosidase.
  
  
 
0.903
LGAS_1263
Mannose-6-phosphate isomerase, type 1.
 
  
 0.853
LGAS_0499
Transcriptional antiterminator, BglG family.
  
  
 0.611
LGAS_0503
Hypothetical protein.
       0.490
Your Current Organism:
Lactobacillus gasseri
NCBI taxonomy Id: 324831
Other names: L. gasseri ATCC 33323 = JCM 1131, Lactobacillus gasseri ATCC 33323, Lactobacillus gasseri ATCC 33323 = JCM 1131, Lactobacillus gasseri DSM 20243, Lactobacillus gasseri NCDO 2233
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