Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LGAS_0518Trehalose-6-phosphate hydrolase. (560 aa)    
Predicted Functional Partners:
LGAS_0257
Alpha-galactosidase.
  
 
 0.926
LGAS_0215
Neopullulanase; Belongs to the glycosyl hydrolase 13 family.
 
 
0.925
LGAS_0399
Beta-fructofuranosidase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
  
 
 0.920
LGAS_1779
Sucrose-6-phosphate hydrolase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
  
 
 0.920
LGAS_0214
Alpha-glucosidase.
  
  
 
0.913
LGAS_1729
Alpha-glucosidase, family 31 of glycosyl hydrolase; Belongs to the glycosyl hydrolase 31 family.
  
 
 0.911
LGAS_0519
Transcriptional regulator, LacI family.
  
  
 0.807
LGAS_0520
Alpha-glucosidase, family 31 of glycosyl hydrolase; Belongs to the glycosyl hydrolase 31 family.
  
  
 0.780
LGAS_0517
Phosphotransferase system, mannose/fructose-specific component IIA.
     
 0.779
LGAS_0514
Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB.
       0.746
Your Current Organism:
Lactobacillus gasseri
NCBI taxonomy Id: 324831
Other names: L. gasseri ATCC 33323 = JCM 1131, Lactobacillus gasseri ATCC 33323, Lactobacillus gasseri ATCC 33323 = JCM 1131, Lactobacillus gasseri DSM 20243, Lactobacillus gasseri NCDO 2233
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