STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LGAS_0529Amino acid ABC transporter substrate-binding protein, PAAT family; TC 3.A.1.3.-. (277 aa)    
Predicted Functional Partners:
LGAS_0530
Amino acid ABC transporter membrane protein 1, PAAT family; TC 3.A.1.3.-.
 0.998
LGAS_0531
Amino acid ABC transporter membrane protein 2, PAAT family; TC 3.A.1.3.-.
 0.998
LGAS_0528
Amino acid ABC transporter ATP-binding protein, PAAT family; TC 3.A.1.3.-.
 0.990
LGAS_0527
Amino acid ABC transporter substrate-binding protein, PAAT family; TC 3.A.1.3.-.
  
  
 
0.901
LGAS_0358
Amino acid ABC transporter membrane protein, PAAT family; TC 3.A.1.3.-.
 
 0.735
LGAS_0844
ABC-type metal ion transport system, periplasmic component/surface antigen; Belongs to the nlpA lipoprotein family.
 
  
 0.573
LGAS_0545
Amino acid ABC transporter ATP-binding protein, PAAT family; TC 3.A.1.3.-.
 
 0.560
LGAS_0085
Amino acid ABC transporter ATP-binding protein, PAAT family; TC 3.A.1.3.-.
 
 0.559
LGAS_0086
ABC transporter, permease protein; TC 3.A.1.3.-; TC 3.A.1.3.-.
 
 
 0.534
LGAS_0359
Amino acid ABC transporter ATP-binding protein, PAAT family; TC 3.A.1.3.-.
 
 
 0.531
Your Current Organism:
Lactobacillus gasseri
NCBI taxonomy Id: 324831
Other names: L. gasseri ATCC 33323 = JCM 1131, Lactobacillus gasseri ATCC 33323, Lactobacillus gasseri ATCC 33323 = JCM 1131, Lactobacillus gasseri DSM 20243, Lactobacillus gasseri NCDO 2233
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.