STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LGAS_0605Phage terminase large subunit. (414 aa)    
Predicted Functional Partners:
LGAS_0603
Phage terminase, small subunit.
 
  
 0.873
LGAS_0607
Phage Mu protein F like protein.
 
     0.873
LGAS_0606
Phage portal protein, SPP1 Gp6-like protein.
 
  
 0.870
LGAS_0604
Homing nuclease of HNH family with NUMOD4 and IENR domains.
 
     0.832
LGAS_0608
Hypothetical protein.
       0.773
LGAS_0665
Phage terminase, small subunit.
 
  
 0.736
LGAS_0609
Phage minor structural protein GP20.
 
    0.680
LGAS_0632
Lyzozyme M1 (1,4-beta-N-acetylmuramidase).
 
     0.679
LGAS_0616
Phage related protein.
  
  
 0.625
LGAS_0695
Lyzozyme M1 (1,4-beta-N-acetylmuramidase).
 
     0.595
Your Current Organism:
Lactobacillus gasseri
NCBI taxonomy Id: 324831
Other names: L. gasseri ATCC 33323 = JCM 1131, Lactobacillus gasseri ATCC 33323, Lactobacillus gasseri ATCC 33323 = JCM 1131, Lactobacillus gasseri DSM 20243, Lactobacillus gasseri NCDO 2233
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