Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LGAS_0724Uncharacterized conserved secreted or membrane protein. (186 aa)    
Predicted Functional Partners:
LGAS_0725
Permease of the major facilitator superfamily.
 
  
 0.950
LGAS_0727
Transcriptional regulator, MerR family.
 
  
 0.916
LGAS_1458
Aminoglycoside phosphotransferase; Belongs to the aminoglycoside phosphotransferase family.
  
     0.598
LGAS_0726
Hypothetical protein.
       0.572
LGAS_0383
Hypothetical protein.
 
     0.538
LGAS_0382
Hypothetical protein.
  
     0.528
LGAS_1038
ABC-type multidrug transport system, ATPase and permease component.
  
    0.518
LGAS_1524
Transcriptional regulator, xre family.
  
     0.489
LGAS_0080
Hypothetical protein.
  
     0.425
LGAS_1039
Aminoglycoside N3'-acetyltransferase.
  
     0.412
Your Current Organism:
Lactobacillus gasseri
NCBI taxonomy Id: 324831
Other names: L. gasseri ATCC 33323 = JCM 1131, Lactobacillus gasseri ATCC 33323, Lactobacillus gasseri ATCC 33323 = JCM 1131, Lactobacillus gasseri DSM 20243, Lactobacillus gasseri NCDO 2233
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