STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LGAS_0775ABC-type oligopeptide transport system, ATPase component; Belongs to the ABC transporter superfamily. (322 aa)    
Predicted Functional Partners:
LGAS_0776
ABC-type dipeptide/oligopeptide/nickel transport system, permease component.
 
 0.999
LGAS_0777
ABC-type dipeptide/oligopeptide/nickel transport system, permease component.
 
 0.999
LGAS_0774
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
 
0.996
LGAS_0778
ABC-type oligopeptide transport system, periplasmic component.
 
 
 0.984
LGAS_0779
ABC-type oligopeptide transport system, periplasmic component.
 
 
 0.979
LGAS_0728
ABC-type oligopeptide transport system, periplasmic component.
 
 
 0.974
LGAS_1666
ABC-type oligopeptide transport system, periplasmic component.
 
 
 0.973
LGAS_0071
ABC-type cobalt transport system, permease component CbiQ related transporter.
  
 
 0.669
ecfT
ABC-type cobalt transport system, permease component CbiQ related transporter; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
 
 0.669
LGAS_1501
ABC-type cobalt transport system, permease component CbiQ related transporter.
  
 
 0.669
Your Current Organism:
Lactobacillus gasseri
NCBI taxonomy Id: 324831
Other names: L. gasseri ATCC 33323 = JCM 1131, Lactobacillus gasseri ATCC 33323, Lactobacillus gasseri ATCC 33323 = JCM 1131, Lactobacillus gasseri DSM 20243, Lactobacillus gasseri NCDO 2233
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.