Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LGAS_0944Adhesion exoprotein. (524 aa)    
Predicted Functional Partners:
LGAS_0942
Adhesion exoprotein.
 
     0.675
LGAS_0943
Adhesion exoprotein.
 
     0.634
LGAS_0410
Adhesion Exoprotein.
  
     0.619
LGAS_0923
Predicted membrane-bound metal-dependent hydrolase.
  
     0.614
LGAS_1458
Aminoglycoside phosphotransferase; Belongs to the aminoglycoside phosphotransferase family.
  
     0.613
LGAS_0945
Predicted hydrolase (HAD superfamily).
 
     0.597
LGAS_0142
Adhesion exoprotein.
 
   
 0.523
LGAS_1671
Possible cell surface protein.
 
   
 0.492
LGAS_0938
Predicted integral membrane protein.
 
     0.478
LGAS_1830
Transcriptional regulator, xre family.
 
     0.477
Your Current Organism:
Lactobacillus gasseri
NCBI taxonomy Id: 324831
Other names: L. gasseri ATCC 33323 = JCM 1131, Lactobacillus gasseri ATCC 33323, Lactobacillus gasseri ATCC 33323 = JCM 1131, Lactobacillus gasseri DSM 20243, Lactobacillus gasseri NCDO 2233
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