Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LGAS_0967Alpha/beta hydrolase superfamily enzyme; Belongs to the UPF0255 family. (388 aa)    
Predicted Functional Partners:
LGAS_0968
Saccharopine dehydrogenase related protein.
 
    0.930
LGAS_0966
Transcriptional regulator, TetR family.
 
    0.872
LGAS_1646
Predicted membrane protein.
  
     0.504
LGAS_0969
Permease of the major facilitator superfamily.
 
     0.488
LGAS_1561
Acetaldehyde dehydrogenase / alcohol dehydrogenase AdhE; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
  
 0.478
LGAS_0398
PTS system sucrose-specific IIBC component; TC 4.A.1.2.12; TC 4.A.1.2.12; TC 4.A.1.2.12.
   
   0.442
LGAS_0535
PTS system beta-glucoside-specific EIIBCA component family protein; TC 4.A.1; TC 4.A.1; TC 4.A.1.
   
   0.442
LGAS_1669
Phosphotransferase system, EIIC; TC 4.A.1.2.6; TC 4.A.1.2.6; TC 4.A.1.2.6.
   
   0.442
LGAS_1755
PTS system, beta-glucoside-specific, IIABC component; TC 4.A.1.2.5; TC 4.A.1.2.5; TC 4.A.1.2.5.
   
   0.442
LGAS_1778
PTS system sucrose-specific IIBC component; TC 4.A.1.2.12; TC 4.A.1.2.12; TC 4.A.1.2.12.
   
   0.442
Your Current Organism:
Lactobacillus gasseri
NCBI taxonomy Id: 324831
Other names: L. gasseri ATCC 33323 = JCM 1131, Lactobacillus gasseri ATCC 33323, Lactobacillus gasseri ATCC 33323 = JCM 1131, Lactobacillus gasseri DSM 20243, Lactobacillus gasseri NCDO 2233
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