Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LGAS_0980Uncharacterized conserved membrane protein; Same as uCOG01554. (123 aa)    
Predicted Functional Partners:
LGAS_0979
Response regulator of the LytR/AlgR family.
 
   
 0.937
LGAS_1459
Beta-lactamase class C related penicillin binding protein.
  
     0.578
LGAS_0981
Cation transport ATPase.
       0.504
LGAS_0982
Copper chaperone.
       0.462
LGAS_0983
DNA-binding ferritin-like protein (oxidative damage protectant).
       0.462
LGAS_1525
ABC-type multidrug transport system, ATPase and permease component.
  
     0.446
LGAS_0984
Crp-like transcriptional regulator.
       0.436
LGAS_0724
Uncharacterized conserved secreted or membrane protein.
  
     0.401
Your Current Organism:
Lactobacillus gasseri
NCBI taxonomy Id: 324831
Other names: L. gasseri ATCC 33323 = JCM 1131, Lactobacillus gasseri ATCC 33323, Lactobacillus gasseri ATCC 33323 = JCM 1131, Lactobacillus gasseri DSM 20243, Lactobacillus gasseri NCDO 2233
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