STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LGAS_1442Predicted ABC-type exoprotein transport system, permease component. (403 aa)    
Predicted Functional Partners:
LGAS_1443
ABC-type multidrug transport system, ATPase component.
 
  
 0.912
trmB
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
       0.831
LGAS_1417
Replicative DNA helicase loader DnaB.
 
    0.784
divIB
Cell division protein FtsQ; Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex; Belongs to the FtsQ/DivIB family. DivIB subfamily.
  
     0.763
LGAS_0066
Hypothetical protein.
  
     0.760
LGAS_1225
Negative regulator of septation ring formation.
  
     0.748
LGAS_1627
Predicted membrane protein.
  
     0.739
LGAS_1444
Diadenosine tetraphosphate (Ap4A) hydrolase related HIT family hydrolase.
     
 0.727
LGAS_1101
Uncharacterized conserved membrane protein.
  
     0.721
LGAS_1738
Uncharacterized membrane-bound protein conserved in bacteria.
  
     0.715
Your Current Organism:
Lactobacillus gasseri
NCBI taxonomy Id: 324831
Other names: L. gasseri ATCC 33323 = JCM 1131, Lactobacillus gasseri ATCC 33323, Lactobacillus gasseri ATCC 33323 = JCM 1131, Lactobacillus gasseri DSM 20243, Lactobacillus gasseri NCDO 2233
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.