STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LGAS_1525ABC-type multidrug transport system, ATPase and permease component. (528 aa)    
Predicted Functional Partners:
LGAS_1524
Transcriptional regulator, xre family.
 
     0.883
LGAS_1843
Cytochrome bd biosynthesis ABC-type transporter, ATPase and permease component.
   
0.738
LGAS_0383
Hypothetical protein.
 
 
 0.733
LGAS_0382
Hypothetical protein.
 
  
 0.695
LGAS_0102
Immunity protein PlnI, membrane-bound protease CAAX family.
 
     0.679
LGAS_0525
ABC-type multidrug transport system, ATPase and permease component.
 
 
0.540
LGAS_0797
ABC-type multidrug transport system, ATPase and permease component.
 
    
0.540
LGAS_1737
ABC-type multidrug transport system, ATPase and permease component.
 
 
0.530
LGAS_1054
Predicted pyrophosphatase.
 
     0.501
LGAS_1830
Transcriptional regulator, xre family.
  
     0.501
Your Current Organism:
Lactobacillus gasseri
NCBI taxonomy Id: 324831
Other names: L. gasseri ATCC 33323 = JCM 1131, Lactobacillus gasseri ATCC 33323, Lactobacillus gasseri ATCC 33323 = JCM 1131, Lactobacillus gasseri DSM 20243, Lactobacillus gasseri NCDO 2233
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.