STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LGAS_1546Aggregation promoting factrelated surface protein. (307 aa)    
Predicted Functional Partners:
LGAS_0252
Hypothetical protein.
 
   0.652
LGAS_1698
Peptidoglycan transpeptidase precursor, ErfK-YbiS-YhnG family.
 
   
 0.597
LGAS_0146
Hypothetical protein.
 
  
 0.590
LGAS_0277
Predicted membrane protein.
 
     0.566
LGAS_0433
Methyl-accepting chemotaxis-like protein.
 
     0.552
LGAS_1225
Negative regulator of septation ring formation.
  
     0.543
LGAS_0044
Adhesion exoprotein.
 
   
 0.540
LGAS_1282
Hypothetical protein.
 
   0.531
LGAS_0071
ABC-type cobalt transport system, permease component CbiQ related transporter.
 
     0.522
LGAS_0912
Periplasmic protease; Belongs to the peptidase S41A family.
     
 0.517
Your Current Organism:
Lactobacillus gasseri
NCBI taxonomy Id: 324831
Other names: L. gasseri ATCC 33323 = JCM 1131, Lactobacillus gasseri ATCC 33323, Lactobacillus gasseri ATCC 33323 = JCM 1131, Lactobacillus gasseri DSM 20243, Lactobacillus gasseri NCDO 2233
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.