STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LGAS_1632Beta-lactamase class A. (314 aa)    
Predicted Functional Partners:
LGAS_1769
Beta-lactamase class A.
  
  
  0.952
LGAS_1856
Beta-lactamase class A.
  
  
  0.922
LGAS_1627
Predicted membrane protein.
 
     0.776
LGAS_1169
BS_ysoA related protein with TPR repeats.
  
     0.763
LGAS_1105
Uncharacterized ABC transporter, permease component.
  
     0.742
LGAS_0224
Hypothetical protein.
  
     0.733
LGAS_1106
Uncharacterized ABC transporter, permease component.
  
     0.730
LGAS_1655
Possible cell surface protein.
 
   
 0.728
LGAS_0044
Adhesion exoprotein.
  
     0.725
LGAS_1101
Uncharacterized conserved membrane protein.
  
     0.724
Your Current Organism:
Lactobacillus gasseri
NCBI taxonomy Id: 324831
Other names: L. gasseri ATCC 33323 = JCM 1131, Lactobacillus gasseri ATCC 33323, Lactobacillus gasseri ATCC 33323 = JCM 1131, Lactobacillus gasseri DSM 20243, Lactobacillus gasseri NCDO 2233
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.