STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LGAS_1731ABC-type uncharacterized transport system, ATPase component. (298 aa)    
Predicted Functional Partners:
LGAS_1730
ABC-type Na+ efflux pump, permease component.
  
 0.979
LGAS_1081
ABC-type antimicrobial peptide transport system, ATPase component.
    
0.905
metN
ABC-type metal ion transport system, ATPase component; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
    
0.862
LGAS_1694
ABC-type antimicrobial peptide transport system, ATPase component.
    
0.836
LGAS_1729
Alpha-glucosidase, family 31 of glycosyl hydrolase; Belongs to the glycosyl hydrolase 31 family.
       0.732
pstB-2
Phosphate ABC transporter ATP-binding protein, PhoT family; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
     
0.620
ugpC
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; TC 3.A.1.1.-; Belongs to the ABC transporter superfamily.
    
0.596
murE
UDP-N-acetylmuramyl tripeptide synthase; Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan.
       0.506
LGAS_1732
Aspartate racemase; Belongs to the aspartate/glutamate racemases family.
       0.505
LGAS_0223
HD superfamily phosphohydrolase.
   
    0.463
Your Current Organism:
Lactobacillus gasseri
NCBI taxonomy Id: 324831
Other names: L. gasseri ATCC 33323 = JCM 1131, Lactobacillus gasseri ATCC 33323, Lactobacillus gasseri ATCC 33323 = JCM 1131, Lactobacillus gasseri DSM 20243, Lactobacillus gasseri NCDO 2233
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.