STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LGAS_1759Transcriptional regulator. (173 aa)    
Predicted Functional Partners:
LGAS_1758
ABC-type antimicrobial peptide transport system, permease component.
 
  
 0.959
LGAS_1757
ABC-type antimicrobial peptide transport system, ATPase component.
 
 
 
 0.923
LGAS_1756
Transcriptional antiterminator, BglG family.
  
 
 0.540
LGAS_1760
Phosphoglycerate mutase family protein.
  
    0.511
LGAS_1761
Phosphoglycerate mutase family protein.
  
    0.511
LGAS_1755
PTS system, beta-glucoside-specific, IIABC component; TC 4.A.1.2.5; TC 4.A.1.2.5; TC 4.A.1.2.5.
     
 0.504
LGAS_1754
6-phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
     
 0.451
pth
peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
  
    0.430
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
   
 
 0.415
LGAS_0162
Transporter, CPA2 family; TC 2.A.37; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
 
   
 0.403
Your Current Organism:
Lactobacillus gasseri
NCBI taxonomy Id: 324831
Other names: L. gasseri ATCC 33323 = JCM 1131, Lactobacillus gasseri ATCC 33323, Lactobacillus gasseri ATCC 33323 = JCM 1131, Lactobacillus gasseri DSM 20243, Lactobacillus gasseri NCDO 2233
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.