Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LGAS_1825CBS domain. (162 aa)    
Predicted Functional Partners:
LGAS_0392
NUDIX family hydrolase; Belongs to the Nudix hydrolase family.
      0.655
LGAS_1826
Cation transport ATPase.
     
 0.593
LGAS_1348
Glucitol/sorbitol PTS, EIIA.
  
     0.538
LGAS_1698
Peptidoglycan transpeptidase precursor, ErfK-YbiS-YhnG family.
  
     0.477
LGAS_0885
RibT protein, riboflavin biosynthesis acetyltransferase (GNAT) family.
 
     0.467
LGAS_0433
Methyl-accepting chemotaxis-like protein.
 
     0.452
LGAS_1225
Negative regulator of septation ring formation.
  
     0.446
LGAS_0273
Septum formation initiator.
 
     0.401
Your Current Organism:
Lactobacillus gasseri
NCBI taxonomy Id: 324831
Other names: L. gasseri ATCC 33323 = JCM 1131, Lactobacillus gasseri ATCC 33323, Lactobacillus gasseri ATCC 33323 = JCM 1131, Lactobacillus gasseri DSM 20243, Lactobacillus gasseri NCDO 2233
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