Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| LGAS_0116 | LGAS_0398 | LGAS_0116 | LGAS_0398 | N-acetylglucosamine 6-phosphate deacetylase. | PTS system sucrose-specific IIBC component; TC 4.A.1.2.12; TC 4.A.1.2.12; TC 4.A.1.2.12. | 0.713 |
| LGAS_0116 | LGAS_1852 | LGAS_0116 | LGAS_1852 | N-acetylglucosamine 6-phosphate deacetylase. | N-acetylglucosamine kinase. | 0.600 |
| LGAS_0116 | murQ | LGAS_0116 | LGAS_1857 | N-acetylglucosamine 6-phosphate deacetylase. | Predicted sugar phosphate isomerase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate. | 0.992 |
| LGAS_0116 | nanE | LGAS_0116 | LGAS_1687 | N-acetylglucosamine 6-phosphate deacetylase. | Putative N-acetylmannosamine-6-phosphate epimerase; Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N- acetylglucosamine-6-phosphate (GlcNAc-6-P). | 0.938 |
| LGAS_0398 | LGAS_0116 | LGAS_0398 | LGAS_0116 | PTS system sucrose-specific IIBC component; TC 4.A.1.2.12; TC 4.A.1.2.12; TC 4.A.1.2.12. | N-acetylglucosamine 6-phosphate deacetylase. | 0.713 |
| LGAS_0398 | murQ | LGAS_0398 | LGAS_1857 | PTS system sucrose-specific IIBC component; TC 4.A.1.2.12; TC 4.A.1.2.12; TC 4.A.1.2.12. | Predicted sugar phosphate isomerase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate. | 0.670 |
| LGAS_0398 | nanE | LGAS_0398 | LGAS_1687 | PTS system sucrose-specific IIBC component; TC 4.A.1.2.12; TC 4.A.1.2.12; TC 4.A.1.2.12. | Putative N-acetylmannosamine-6-phosphate epimerase; Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N- acetylglucosamine-6-phosphate (GlcNAc-6-P). | 0.618 |
| LGAS_1748 | murQ | LGAS_1748 | LGAS_1857 | Hypothetical protein. | Predicted sugar phosphate isomerase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate. | 0.833 |
| LGAS_1850 | LGAS_1852 | LGAS_1850 | LGAS_1852 | Beta-lactamase class C or other penicillin binding protein. | N-acetylglucosamine kinase. | 0.616 |
| LGAS_1850 | LGAS_1854 | LGAS_1850 | LGAS_1854 | Beta-lactamase class C or other penicillin binding protein. | Predicted esterase. | 0.440 |
| LGAS_1850 | LGAS_1855 | LGAS_1850 | LGAS_1855 | Beta-lactamase class C or other penicillin binding protein. | L-alanine-DL-glutamate epimerase related enzyme of enolase superfamily. | 0.560 |
| LGAS_1850 | LGAS_1856 | LGAS_1850 | LGAS_1856 | Beta-lactamase class C or other penicillin binding protein. | Beta-lactamase class A. | 0.587 |
| LGAS_1850 | murQ | LGAS_1850 | LGAS_1857 | Beta-lactamase class C or other penicillin binding protein. | Predicted sugar phosphate isomerase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate. | 0.873 |
| LGAS_1852 | LGAS_0116 | LGAS_1852 | LGAS_0116 | N-acetylglucosamine kinase. | N-acetylglucosamine 6-phosphate deacetylase. | 0.600 |
| LGAS_1852 | LGAS_1850 | LGAS_1852 | LGAS_1850 | N-acetylglucosamine kinase. | Beta-lactamase class C or other penicillin binding protein. | 0.616 |
| LGAS_1852 | LGAS_1853 | LGAS_1852 | LGAS_1853 | N-acetylglucosamine kinase. | Hypothetical protein. | 0.812 |
| LGAS_1852 | LGAS_1854 | LGAS_1852 | LGAS_1854 | N-acetylglucosamine kinase. | Predicted esterase. | 0.744 |
| LGAS_1852 | LGAS_1855 | LGAS_1852 | LGAS_1855 | N-acetylglucosamine kinase. | L-alanine-DL-glutamate epimerase related enzyme of enolase superfamily. | 0.786 |
| LGAS_1852 | LGAS_1856 | LGAS_1852 | LGAS_1856 | N-acetylglucosamine kinase. | Beta-lactamase class A. | 0.733 |
| LGAS_1852 | murQ | LGAS_1852 | LGAS_1857 | N-acetylglucosamine kinase. | Predicted sugar phosphate isomerase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate. | 0.849 |
page 1 of 3