STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppha_0035KEGG: cch:Cag_1582 heterodisulfide reductase, putative. (393 aa)    
Predicted Functional Partners:
Ppha_0036
Methyl-viologen-reducing hydrogenase delta subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; methyl-viologen-reducing hydrogenase delta subunit; FAD dependent oxidoreductase; KEGG: cch:Cag_1583 heterodisulfide reductase, subunit A/hydrogenase, delta subunit, putative.
 
 
 0.968
Ppha_0037
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: cch:Cag_1584 heterodisulfide reductase, subunit A.
 
 
 0.916
Ppha_0040
TIGRFAM: adenylylsulfate reductase, beta subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: cte:CT0864 adenylylsulfate reductase, subunit B.
 
   
 0.834
Ppha_0039
TIGRFAM: adenylylsulfate reductase, alpha subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: cch:Cag_1585 adenylylsulfate reductase.
 
  
 0.830
Ppha_0032
PFAM: protein of unknown function UPF0153; KEGG: cte:CT0872 hypothetical protein.
  
   
 0.767
Ppha_2309
PFAM: Polysulphide reductase NrfD; KEGG: cph:Cpha266_0140 polysulphide reductase, NrfD.
  
   
 0.767
Ppha_2313
PFAM: Nitrate reductase gamma subunit; KEGG: cph:Cpha266_0136 nitrate reductase, gamma subunit.
 
   
 0.734
Ppha_2311
KEGG: cch:Cag_1946 hypothetical protein.
  
     0.724
Ppha_1305
PFAM: methyl-viologen-reducing hydrogenase delta subunit; KEGG: cph:Cpha266_1259 methyl-viologen-reducing hydrogenase, delta subunit.
 
 
 0.710
Ppha_0034
KEGG: cch:Cag_1214 hypothetical protein.
  
   
 0.706
Your Current Organism:
Pelodictyon phaeoclathratiforme
NCBI taxonomy Id: 324925
Other names: P. phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme DSM 5477, Pelodictyon phaeoclathratiforme str. BU-1, Pelodictyon phaeoclathratiforme strain BU-1
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