STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppha_0045PFAM: ATP-dependent Clp protease adaptor protein ClpS; KEGG: cph:Cpha266_0046 ATP-dependent Clp protease adaptor protein ClpS; Belongs to the ClpS family. (105 aa)    
Predicted Functional Partners:
Ppha_0245
PFAM: AAA ATPase central domain protein; Clp domain protein; SMART: AAA ATPase; KEGG: cph:Cpha266_2449 AAA ATPase, central domain protein; Belongs to the ClpA/ClpB family.
  
 
 0.748
Ppha_2617
PFAM: UvrB/UvrC protein; AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: cph:Cpha266_0334 ATPase AAA-2 domain protein; Belongs to the ClpA/ClpB family.
  
 
 0.748
Ppha_2812
ATPase AAA-2 domain protein; PFAM: ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: cph:Cpha266_2577 ATPase AAA-2 domain protein.
  
 
 0.748
Ppha_2548
KEGG: pvi:Cvib_0351 hypothetical protein.
  
    0.702
Ppha_0409
PFAM: protein of unknown function DUF1239; KEGG: cph:Cpha266_0380 hypothetical protein.
  
     0.688
Ppha_0723
PFAM: metallophosphoesterase; KEGG: plt:Plut_1594 hypothetical protein.
  
     0.633
clpP
ATP-dependent Clp protease, proteolytic subunit ClpP; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.
   
 
 0.622
Ppha_0500
PFAM: phosphatidate cytidylyltransferase; KEGG: pvi:Cvib_1470 phosphatidate cytidylyltransferase.
  
     0.618
Ppha_0046
PFAM: peptidase U61 LD-carboxypeptidase A; KEGG: cph:Cpha266_0047 muramoyltetrapeptide carboxypeptidase.
       0.587
Ppha_1194
PFAM: phospholipid/glycerol acyltransferase; KEGG: cph:Cpha266_1013 phospholipid/glycerol acyltransferase.
  
     0.559
Your Current Organism:
Pelodictyon phaeoclathratiforme
NCBI taxonomy Id: 324925
Other names: P. phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme DSM 5477, Pelodictyon phaeoclathratiforme str. BU-1, Pelodictyon phaeoclathratiforme strain BU-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.