STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppha_0207PFAM: ABC-3 protein; KEGG: cch:Cag_1676 ABC 3 transport family protein. (273 aa)    
Predicted Functional Partners:
Ppha_0206
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cph:Cpha266_2475 ABC transporter related.
 
 0.999
Ppha_0205
PFAM: periplasmic solute binding protein; KEGG: cph:Cpha266_2476 periplasmic solute binding protein; Belongs to the bacterial solute-binding protein 9 family.
 
 0.998
leuA
2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily.
       0.486
Ppha_0490
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cph:Cpha266_0484 ABC transporter related.
     
 0.451
Ppha_2546
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pvi:Cvib_0353 ABC transporter related.
     
 0.438
Ppha_1183
KEGG: fjo:Fjoh_3045 natural resistance-associated macrophage protein.
   
  
 0.405
Ppha_1894
PFAM: natural resistance-associated macrophage protein; KEGG: cte:CT1010 natural resistance-associated macrophage protein family protein.
   
  
 0.405
Your Current Organism:
Pelodictyon phaeoclathratiforme
NCBI taxonomy Id: 324925
Other names: P. phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme DSM 5477, Pelodictyon phaeoclathratiforme str. BU-1, Pelodictyon phaeoclathratiforme strain BU-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.