Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ppha_0349KEGG: gsu:GSU0055 hypothetical protein. (78 aa)    
Predicted Functional Partners:
Ppha_0348
TIGRFAM: addiction module component, TIGR02574 family; PFAM: Putative addiction module component CHP02574 family protein; KEGG: cch:Cag_0032 hypothetical protein.
 
     0.942
Ppha_0279
PFAM: plasmid stabilization system; KEGG: cph:Cpha266_0252 hypothetical protein.
  
     0.771
Ppha_1705
PFAM: plasmid stabilization system; KEGG: cch:Cag_1130 hypothetical protein.
  
     0.770
Ppha_0061
TIGRFAM: addiction module component, TIGR02574 family; PFAM: Putative addiction module component CHP02574 family protein; KEGG: gsu:GSU0056 hypothetical protein.
 
     0.748
Ppha_2372
TIGRFAM: addiction module component, TIGR02574 family; PFAM: Putative addiction module component CHP02574 family protein; KEGG: gsu:GSU0056 hypothetical protein.
 
     0.736
Ppha_1759
TIGRFAM: addiction module component, TIGR02574 family; PFAM: Putative addiction module component CHP02574 family protein; KEGG: cte:CT1476 hypothetical protein.
 
     0.680
Ppha_0145
KEGG: cph:Cpha266_1216 hypothetical protein.
  
 
 0.469
Ppha_1179
KEGG: ppd:Ppro_1116 transcriptional regulator, CopG family.
  
 
 0.469
Ppha_2635
TIGRFAM: addiction module component, TIGR02574 family; PFAM: Putative addiction module component CHP02574 family protein; KEGG: cph:Cpha266_0253 putative addiction module component, TIGR02574 family.
 
     0.453
Your Current Organism:
Pelodictyon phaeoclathratiforme
NCBI taxonomy Id: 324925
Other names: P. phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme DSM 5477, Pelodictyon phaeoclathratiforme str. BU-1, Pelodictyon phaeoclathratiforme strain BU-1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.