STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppha_0406PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: cph:Cpha266_0377 glyoxalase/bleomycin resistance protein/dioxygenase. (166 aa)    
Predicted Functional Partners:
Ppha_0403
PFAM: YicC domain protein; domain of unknown function DUF1732; KEGG: cch:Cag_1457 hypothetical protein.
 
     0.782
Ppha_0405
KEGG: plt:Plut_1772 hypothetical protein.
       0.778
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
       0.758
Ppha_1876
PFAM: ferrochelatase; KEGG: cph:Cpha266_0958 ferrochelatase; Belongs to the ferrochelatase family.
  
     0.726
Ppha_2603
KEGG: cph:Cpha266_0345 hypothetical protein.
  
     0.686
Ppha_0488
PFAM: ferrochelatase; KEGG: cph:Cpha266_0481 ferrochelatase; Belongs to the ferrochelatase family.
  
     0.637
Ppha_0723
PFAM: metallophosphoesterase; KEGG: plt:Plut_1594 hypothetical protein.
  
     0.621
Ppha_1504
KEGG: cph:Cpha266_1536 hypothetical protein.
  
  
 0.592
Ppha_1486
KEGG: cph:Cpha266_1516 hypothetical protein.
  
     0.577
Ppha_1194
PFAM: phospholipid/glycerol acyltransferase; KEGG: cph:Cpha266_1013 phospholipid/glycerol acyltransferase.
  
     0.575
Your Current Organism:
Pelodictyon phaeoclathratiforme
NCBI taxonomy Id: 324925
Other names: P. phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme DSM 5477, Pelodictyon phaeoclathratiforme str. BU-1, Pelodictyon phaeoclathratiforme strain BU-1
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