STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppha_0488PFAM: ferrochelatase; KEGG: cph:Cpha266_0481 ferrochelatase; Belongs to the ferrochelatase family. (335 aa)    
Predicted Functional Partners:
Ppha_2540
PFAM: FAD dependent oxidoreductase; KEGG: cph:Cpha266_2269 FAD dependent oxidoreductase.
 
 0.974
Ppha_1795
Magnesium chelatase ATPase subunit D; Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.
  
 
 0.933
Ppha_1796
Magnesium chelatase ATPase subunit I; Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.
   
 
 0.908
Ppha_1794
KEGG: plt:Plut_0787 magnesium-chelatase, subunit H; TIGRFAM: magnesium chelatase, H subunit; PFAM: CobN/magnesium chelatase.
   
 
 0.907
Ppha_2581
Magnesium chelatase, H subunit; KEGG: cph:Cpha266_2311 hydrogenobyrinic acid a,c-diamide cobaltochelatase; TIGRFAM: magnesium chelatase, H subunit; PFAM: CobN/magnesium chelatase.
   
 
 0.907
Ppha_2583
KEGG: cph:Cpha266_2313 magnesium chelatase; TIGRFAM: magnesium chelatase, H subunit; PFAM: CobN/magnesium chelatase.
   
 
 0.907
Ppha_0085
PFAM: Ferritin Dps family protein; KEGG: cph:Cpha266_2674 ferritin, Dps family protein; Belongs to the Dps family.
     
  0.900
Ppha_0482
KEGG: cph:Cpha266_0474 hypothetical protein.
 
  
 0.778
Ppha_2743
KEGG: cph:Cpha266_0192 hypothetical protein.
 
  
 0.776
Ppha_0028
KEGG: cch:Cag_0034 hypothetical protein.
  
     0.768
Your Current Organism:
Pelodictyon phaeoclathratiforme
NCBI taxonomy Id: 324925
Other names: P. phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme DSM 5477, Pelodictyon phaeoclathratiforme str. BU-1, Pelodictyon phaeoclathratiforme strain BU-1
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