Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Ppha_0529Nucleotidyl transferase; PFAM: CBS domain containing protein; Nucleotidyl transferase; KEGG: tdn:Tmden_0598 nucleotidyl transferase. (352 aa)    
Predicted Functional Partners:
Ppha_0524
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: lic:LIC12176 UDP-glucose 4-epimerase.
 
 
 0.954
Ppha_0528
PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: syw:SYNW0449 putative N-acetylglucosamine-6-phosphate 2-epimerase.
 
 
 
 0.948
Ppha_0525
PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: lic:LIC12175 aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.935
Ppha_0526
PFAM: transferase hexapeptide repeat containing protein; KEGG: lic:LIC12174 acetyl transferase.
 
     0.927
Ppha_0530
KEGG: lpc:LPC_2544 LPS biosynthesis protein, PseA-like protein.
 
    0.926
Ppha_0527
PFAM: N-acetylneuraminic acid synthase domain; SAF domain protein; KEGG: syw:SYNW0448 putative N-acetylneuraminic acid synthetase.
 
  
 0.894
rpsB
PFAM: ribosomal protein S2; KEGG: cph:Cpha266_2010 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.
  
   0.886
rpsE
Ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family.
   
   0.863
Ppha_0559
PFAM: NAD-dependent epimerase/dehydratase; KEGG: drm:Dred_3032 NAD-dependent epimerase/dehydratase.
  
 
 0.861
Ppha_0534
PFAM: acylneuraminate cytidylyltransferase; KEGG: dvl:Dvul_2588 N-acylneuraminate cytidylyltransferase.
 
  
 0.845
Your Current Organism:
Pelodictyon phaeoclathratiforme
NCBI taxonomy Id: 324925
Other names: P. phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme DSM 5477, Pelodictyon phaeoclathratiforme str. BU-1, Pelodictyon phaeoclathratiforme strain BU-1
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