Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
Ppha_0567PFAM: glycosyl transferase family 2; KEGG: rma:Rmag_0889 glycosyl transferase, family 2. (252 aa)    
Predicted Functional Partners:
fcl
NAD-dependent epimerase/dehydratase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.
 
    0.876
Ppha_0566
PFAM: glycosyl transferase family 2; KEGG: bvu:BVU_2654 glycosyltransferase family 2.
 
     0.837
Ppha_0568
PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: cph:Cpha266_2616 NAD-dependent epimerase/dehydratase.
 
    0.815
Ppha_0565
Hypothetical protein; KEGG: ret:RHE_CH03209 putative methyltransferase protein.
 
     0.770
Ppha_2600
PFAM: glycosyl transferase family 2; KEGG: cch:Cag_1479 glycosyltransferase involved in cell wall biogenesis-like.
  
     0.734
gmd
GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
 
  
 0.723
Ppha_1144
PFAM: glycosyl transferase family 2; KEGG: cch:Cag_1106 glycosyl transferase.
  
     0.720
Ppha_0569
PFAM: sugar transferase; KEGG: cph:Cpha266_2615 sugar transferase.
  
  
 0.705
Ppha_0383
PFAM: glycosyl transferase family 2; KEGG: cte:CT0216 glycosyl transferase.
 
  
 0.683
Ppha_1672
PFAM: glycosyl transferase family 2; KEGG: cph:Cpha266_1049 glycosyl transferase, family 2.
  
     0.683
Your Current Organism:
Pelodictyon phaeoclathratiforme
NCBI taxonomy Id: 324925
Other names: P. phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme DSM 5477, Pelodictyon phaeoclathratiforme str. BU-1, Pelodictyon phaeoclathratiforme strain BU-1
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