Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
Ppha_0578PFAM: transferase hexapeptide repeat containing protein; KEGG: bxe:Bxe_A2414 putative O-acyltransferase, CysE/LacA/LpxA/NodL family. (200 aa)    
Predicted Functional Partners:
Ppha_0574
PFAM: sugar transferase; KEGG: rrs:RoseRS_4262 undecaprenyl-phosphate galactose phosphotransferase.
 
  
 0.782
Ppha_0576
PFAM: AMP-dependent synthetase and ligase; KEGG: pat:Patl_3072 hypothetical protein.
 
     0.774
Ppha_0536
PFAM: transferase hexapeptide repeat containing protein; KEGG: vvy:VV0322 acetyltransferase.
  
     0.770
Ppha_0561
KEGG: bxe:Bxe_C1079 putative acetyltransferase.
  
     0.765
Ppha_0575
KEGG: pat:Patl_3073 hypothetical protein.
     
 0.729
Ppha_0577
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: pat:Patl_3071 short-chain dehydrogenase/reductase SDR.
  
  
 0.725
Ppha_0579
PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: rme:Rmet_2724 DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.694
Ppha_1019
KEGG: cph:Cpha266_1831 N-acetylmannosaminyltransferase; TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF; Belongs to the glycosyltransferase 26 family.
 
  
 0.575
Ppha_0573
PFAM: glycosyl transferase group 1; KEGG: eba:ebA5893 predicted glycosyltransferase.
  
    0.552
Ppha_1007
KEGG: cph:Cpha266_1819 uncharacterized protein involved in exopolysaccharide biosynthesis-like.
 
  
 0.549
Your Current Organism:
Pelodictyon phaeoclathratiforme
NCBI taxonomy Id: 324925
Other names: P. phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme DSM 5477, Pelodictyon phaeoclathratiforme str. BU-1, Pelodictyon phaeoclathratiforme strain BU-1
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