STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppha_0591KEGG: cph:Cpha266_2601 hypothetical protein. (66 aa)    
Predicted Functional Partners:
Ppha_0590
KEGG: cph:Cpha266_2602 hypothetical protein.
       0.773
gmd-2
GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
       0.578
Ppha_2824
KEGG: mar:MAE_61600 predicted nucleic acid-binding protein.
  
     0.498
Ppha_0162
KEGG: cph:Cpha266_0648 hypothetical protein.
  
     0.485
Ppha_2119
KEGG: cch:Cag_1343 hypothetical protein.
  
     0.427
Ppha_1125
PFAM: Cobyrinic acid ac-diamide synthase; KEGG: aeh:Mlg_2299 cobyrinic acid a,c-diamide synthase.
  
     0.404
Your Current Organism:
Pelodictyon phaeoclathratiforme
NCBI taxonomy Id: 324925
Other names: P. phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme DSM 5477, Pelodictyon phaeoclathratiforme str. BU-1, Pelodictyon phaeoclathratiforme strain BU-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.