node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ppha_0657 | Ppha_0659 | Ppha_0657 | Ppha_0659 | PFAM: protein of unknown function DUF28; KEGG: cch:Cag_0165 hypothetical protein. | PFAM: CDP-alcohol phosphatidyltransferase; KEGG: plt:Plut_1641 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.771 |
Ppha_0657 | pheA | Ppha_0657 | Ppha_0656 | PFAM: protein of unknown function DUF28; KEGG: cch:Cag_0165 hypothetical protein. | PFAM: prephenate dehydratase; amino acid-binding ACT domain protein; KEGG: cph:Cpha266_0537 prephenate dehydratase. | 0.592 |
Ppha_0657 | polA | Ppha_0657 | Ppha_0655 | PFAM: protein of unknown function DUF28; KEGG: cch:Cag_0165 hypothetical protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.618 |
Ppha_0657 | ruvC | Ppha_0657 | Ppha_0658 | PFAM: protein of unknown function DUF28; KEGG: cch:Cag_0165 hypothetical protein. | Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. | 0.831 |
Ppha_0659 | Ppha_0657 | Ppha_0659 | Ppha_0657 | PFAM: CDP-alcohol phosphatidyltransferase; KEGG: plt:Plut_1641 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | PFAM: protein of unknown function DUF28; KEGG: cch:Cag_0165 hypothetical protein. | 0.771 |
Ppha_0659 | pheA | Ppha_0659 | Ppha_0656 | PFAM: CDP-alcohol phosphatidyltransferase; KEGG: plt:Plut_1641 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | PFAM: prephenate dehydratase; amino acid-binding ACT domain protein; KEGG: cph:Cpha266_0537 prephenate dehydratase. | 0.540 |
Ppha_0659 | polA | Ppha_0659 | Ppha_0655 | PFAM: CDP-alcohol phosphatidyltransferase; KEGG: plt:Plut_1641 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.600 |
Ppha_0659 | ruvC | Ppha_0659 | Ppha_0658 | PFAM: CDP-alcohol phosphatidyltransferase; KEGG: plt:Plut_1641 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. | 0.771 |
Ppha_0672 | ruvC | Ppha_0672 | Ppha_0658 | Mg chelatase, subunit ChlI; KEGG: cch:Cag_1757 Mg chelatase-related protein; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase. | Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. | 0.537 |
Ppha_2206 | polA | Ppha_2206 | Ppha_0655 | TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: cph:Cpha266_0687 single-stranded-DNA-specific exonuclease RecJ. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.621 |
Ppha_2206 | recO | Ppha_2206 | Ppha_2799 | TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: cph:Cpha266_0687 single-stranded-DNA-specific exonuclease RecJ. | DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination. | 0.457 |
Ppha_2206 | ruvA | Ppha_2206 | Ppha_0425 | TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: cph:Cpha266_0687 single-stranded-DNA-specific exonuclease RecJ. | Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | 0.466 |
Ppha_2206 | ruvB | Ppha_2206 | Ppha_0693 | TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: cph:Cpha266_0687 single-stranded-DNA-specific exonuclease RecJ. | Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.471 |
Ppha_2206 | ruvC | Ppha_2206 | Ppha_0658 | TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: cph:Cpha266_0687 single-stranded-DNA-specific exonuclease RecJ. | Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. | 0.531 |
pheA | Ppha_0657 | Ppha_0656 | Ppha_0657 | PFAM: prephenate dehydratase; amino acid-binding ACT domain protein; KEGG: cph:Cpha266_0537 prephenate dehydratase. | PFAM: protein of unknown function DUF28; KEGG: cch:Cag_0165 hypothetical protein. | 0.592 |
pheA | Ppha_0659 | Ppha_0656 | Ppha_0659 | PFAM: prephenate dehydratase; amino acid-binding ACT domain protein; KEGG: cph:Cpha266_0537 prephenate dehydratase. | PFAM: CDP-alcohol phosphatidyltransferase; KEGG: plt:Plut_1641 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.540 |
pheA | polA | Ppha_0656 | Ppha_0655 | PFAM: prephenate dehydratase; amino acid-binding ACT domain protein; KEGG: cph:Cpha266_0537 prephenate dehydratase. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.814 |
pheA | ruvC | Ppha_0656 | Ppha_0658 | PFAM: prephenate dehydratase; amino acid-binding ACT domain protein; KEGG: cph:Cpha266_0537 prephenate dehydratase. | Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. | 0.562 |
polA | Ppha_0657 | Ppha_0655 | Ppha_0657 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | PFAM: protein of unknown function DUF28; KEGG: cch:Cag_0165 hypothetical protein. | 0.618 |
polA | Ppha_0659 | Ppha_0655 | Ppha_0659 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | PFAM: CDP-alcohol phosphatidyltransferase; KEGG: plt:Plut_1641 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.600 |