STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppha_0669KEGG: plt:Plut_1632 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily. (328 aa)    
Predicted Functional Partners:
Ppha_1644
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cph:Cpha266_1676 binding-protein-dependent transport systems inner membrane component.
 
 0.997
Ppha_0692
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: plt:Plut_1620 peptide ABC transporter, permease protein.
 0.993
Ppha_0982
PFAM: extracellular solute-binding protein family 5; KEGG: cph:Cpha266_1789 extracellular solute-binding protein, family 5.
 
 
 0.981
Ppha_0691
PFAM: extracellular solute-binding protein family 5; KEGG: cph:Cpha266_0567 extracellular solute-binding protein, family 5.
 
 
 0.980
Ppha_2146
KEGG: cph:Cpha266_0879 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
  
 
0.909
Ppha_0670
KEGG: cch:Cag_1704 peptidase S49, protease IV; TIGRFAM: signal peptide peptidase SppA, 67K type; signal peptide peptidase SppA, 36K type; PFAM: peptidase S49.
       0.778
Ppha_1635
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: plt:Plut_1335 ATPase.
 
     
0.672
Ppha_1225
PFAM: CopG domain protein DNA-binding domain protein; KEGG: cch:Cag_1311 hypothetical protein.
  
  
 0.627
panC
Pantoate/beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.
       0.549
rsmI
Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
       0.549
Your Current Organism:
Pelodictyon phaeoclathratiforme
NCBI taxonomy Id: 324925
Other names: P. phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme DSM 5477, Pelodictyon phaeoclathratiforme str. BU-1, Pelodictyon phaeoclathratiforme strain BU-1
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