STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppha_0760PFAM: protein of unknown function DUF1703; KEGG: cch:Cag_0755 hypothetical protein. (569 aa)    
Predicted Functional Partners:
Ppha_0758
PFAM: regulatory protein TetR; KEGG: rrs:RoseRS_0017 transcriptional regulator, TetR family.
  
  
 0.786
Ppha_0759
KEGG: cph:Cpha266_0062 NADPH-dependent FMN reductase.
  
  
 0.780
Ppha_2606
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
  
 
 0.767
Ppha_0596
KEGG: cch:Cag_1240 hypothetical protein.
  
     0.586
Ppha_0599
KEGG: cch:Cag_1240 hypothetical protein.
  
     0.566
Ppha_0597
KEGG: cch:Cag_1240 hypothetical protein.
  
     0.557
Ppha_2294
KEGG: cch:Cag_1240 hypothetical protein.
  
     0.556
Ppha_2444
KEGG: cch:Cag_1240 hypothetical protein.
  
     0.555
Ppha_0749
KEGG: cch:Cag_1091 hypothetical protein.
  
     0.551
Ppha_0616
KEGG: cch:Cag_1240 hypothetical protein.
  
     0.549
Your Current Organism:
Pelodictyon phaeoclathratiforme
NCBI taxonomy Id: 324925
Other names: P. phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme DSM 5477, Pelodictyon phaeoclathratiforme str. BU-1, Pelodictyon phaeoclathratiforme strain BU-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.