STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppha_0792KEGG: mmw:Mmwyl1_0848 hypothetical protein. (217 aa)    
Predicted Functional Partners:
Ppha_0143
KEGG: cph:Cpha266_0774 hypothetical protein.
  
     0.642
Ppha_0904
ATPase; KEGG: cph:Cpha266_2115 ATPase.
  
     0.535
Ppha_1455
Putative transcriptional regulator; PFAM: AAA-4 family protein; KEGG: cph:Cpha266_1129 putative transcriptional regulator.
  
     0.513
Ppha_0263
KEGG: cch:Cag_0509 hypothetical protein.
  
     0.480
Ppha_0363
KEGG: mbu:Mbur_0507 divergent AAA ATPase.
  
     0.463
Ppha_2828
KEGG: tex:Teth514_0739 ATPase (AAA+ superfamily)-like protein.
  
     0.424
Ppha_0889
Putative transcriptional regulator; PFAM: AAA-4 family protein; KEGG: gur:Gura_2922 putative transcriptional regulator.
  
     0.415
Your Current Organism:
Pelodictyon phaeoclathratiforme
NCBI taxonomy Id: 324925
Other names: P. phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme DSM 5477, Pelodictyon phaeoclathratiforme str. BU-1, Pelodictyon phaeoclathratiforme strain BU-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.