STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppha_0816PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: cch:Cag_1927 twin-arginine translocation pathway signal; Belongs to the 5'-nucleotidase family. (586 aa)    
Predicted Functional Partners:
Ppha_0813
PFAM: Sulphur oxidation protein SoxZ; KEGG: cch:Cag_1924 sulfur oxidation protein SoxZ.
 
 
 0.993
Ppha_0812
KEGG: cch:Cag_1923 twin-arginine translocation pathway signal.
 
 
 0.992
Ppha_0814
Sulfur oxidation protein SoxA; C-type monoheme cytochrome, which is part of the SoxAX cytochrome complex involved in sulfur oxidation. The SoxAX complex catalyzes the formation of a heterodisulfide bond between the conserved cysteine residue on a sulfur carrier SoxYZ complex subunit SoxY and thiosulfate or other inorganic sulfur substrates. This leads to the liberation of two electrons, which may be transferred from the SoxAX complex to another cytochrome c and which then may be used for reductive CO(2) fixation.
 
  
 0.990
Ppha_0009
KEGG: cph:Cpha266_0029 thiosulfate-binding protein SoxY.
 
 
 0.988
Ppha_0010
PFAM: Sulphur oxidation protein SoxZ; KEGG: cph:Cpha266_0030 sulfur oxidation protein SoxZ.
 
 
 0.988
Ppha_0811
KEGG: cch:Cag_1922 sulfur oxidation protein SoxX.
 
  
 0.984
Ppha_0912
PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: cch:Cag_0620 twin-arginine translocation pathway signal; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
    
 0.922
sat
KEGG: cch:Cag_1587 ATP-sulfurylase; TIGRFAM: sulfate adenylyltransferase; PFAM: ATP-sulfurylase; Belongs to the sulfate adenylyltransferase family.
     
  0.900
Ppha_0241
TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: plt:Plut_1552 thiosulphate-binding protein.
     
  0.900
Ppha_1211
PFAM: DoxX family protein; KEGG: cph:Cpha266_1543 DoxX family protein.
     
  0.900
Your Current Organism:
Pelodictyon phaeoclathratiforme
NCBI taxonomy Id: 324925
Other names: P. phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme DSM 5477, Pelodictyon phaeoclathratiforme str. BU-1, Pelodictyon phaeoclathratiforme strain BU-1
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