STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppha_0901KEGG: cch:Cag_0838 hypothetical protein. (483 aa)    
Predicted Functional Partners:
Ppha_0900
KEGG: cch:Cag_0839 hypothetical protein.
 
     0.950
Ppha_0895
KEGG: cch:Cag_0843 hypothetical protein.
 
  
 0.832
Ppha_0891
KEGG: cph:Cpha266_1443 hypothetical protein.
 
   
 0.827
Ppha_0892
KEGG: cch:Cag_0843 hypothetical protein.
 
  
 0.795
Ppha_2283
PFAM: protein of unknown function DUF214; KEGG: cph:Cpha266_1982 cell division protein FtsX; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
   
 
 0.660
Ppha_0907
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pvi:Cvib_1198 cell division ATP-binding protein FtsE.
   
 
 0.545
Ppha_0898
Putative transcriptional regulator; TIGRFAM: addiction module antidote protein; KEGG: mar:MAE_47260 hypothetical protein.
       0.486
Ppha_0899
TIGRFAM: addiction module killer protein; PFAM: protein of unknown function DUF891; KEGG: gme:Gmet_2533 protein of unknown function DUF891.
       0.486
Ppha_1135
KEGG: eba:ebA5226 hypothetical protein.
  
     0.442
Ppha_1404
KEGG: cph:Cpha266_1289 hypothetical protein.
  
     0.442
Your Current Organism:
Pelodictyon phaeoclathratiforme
NCBI taxonomy Id: 324925
Other names: P. phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme DSM 5477, Pelodictyon phaeoclathratiforme str. BU-1, Pelodictyon phaeoclathratiforme strain BU-1
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.