STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppha_0957PFAM: ADP-ribosylation/Crystallin J1; KEGG: plt:Plut_0825 putative ribosylglycohydrolase. (284 aa)    
Predicted Functional Partners:
Ppha_0956
PFAM: Helix-turn-helix type 11 domain protein; KEGG: pvi:Cvib_0086 helix-turn-helix, type 11 domain protein.
       0.560
Ppha_0087
PFAM: nitrogen regulatory protein P-II; KEGG: cch:Cag_1998 nitrogen regulatory protein P-II (GlnB, GlnK).
    
 
 0.532
Ppha_1950
PFAM: nitrogen regulatory protein P-II; KEGG: pvi:Cvib_1344 nitrogen regulatory protein P-II.
    
 
 0.532
Ppha_1951
PFAM: nitrogen regulatory protein P-II; KEGG: cte:CT1535 nitrogen regulatory protein, P-II family; Belongs to the P(II) protein family.
    
 
 0.532
Your Current Organism:
Pelodictyon phaeoclathratiforme
NCBI taxonomy Id: 324925
Other names: P. phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme DSM 5477, Pelodictyon phaeoclathratiforme str. BU-1, Pelodictyon phaeoclathratiforme strain BU-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.