STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppha_0966PFAM: transposase IS204/IS1001/IS1096/IS1165 family protein; KEGG: pvi:Cvib_0620 transposase, IS204/IS1001/IS1096/IS1165 family protein. (406 aa)    
Predicted Functional Partners:
Ppha_1666
PFAM: transposase IS4 family protein; KEGG: mar:MAE_30320 transposase.
  
     0.519
Ppha_2029
PFAM: transposase IS4 family protein; KEGG: mar:MAE_30320 transposase.
  
     0.519
Ppha_2231
PFAM: transposase IS4 family protein; KEGG: mar:MAE_30320 transposase.
  
     0.507
Ppha_2593
PFAM: transposase IS4 family protein; KEGG: mar:MAE_30320 transposase.
  
     0.505
Ppha_0603
PFAM: transposase IS4 family protein; KEGG: cph:Cpha266_0352 transposase, IS4 family protein.
  
     0.416
Your Current Organism:
Pelodictyon phaeoclathratiforme
NCBI taxonomy Id: 324925
Other names: P. phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme DSM 5477, Pelodictyon phaeoclathratiforme str. BU-1, Pelodictyon phaeoclathratiforme strain BU-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.