Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Ppha_1006PFAM: glycosyl transferase group 1; KEGG: cph:Cpha266_1818 glycosyl transferase, group 1. (382 aa)    
Predicted Functional Partners:
Ppha_1005
KEGG: cph:Cpha266_1817 serine O-acetyltransferase.
 
    0.827
Ppha_1007
KEGG: cph:Cpha266_1819 uncharacterized protein involved in exopolysaccharide biosynthesis-like.
 
  
 0.817
Ppha_1004
KEGG: cph:Cpha266_1816 hypothetical protein.
 
  
 0.816
Ppha_1008
PFAM: polysaccharide biosynthesis protein; KEGG: cph:Cpha266_0889 polysaccharide biosynthesis protein.
  
  
 0.771
Ppha_0389
PFAM: glycosyl transferase group 1; KEGG: pvi:Cvib_0692 glycosyl transferase, group 1.
  
     0.650
Ppha_0557
PFAM: glycosyl transferase group 1; KEGG: sus:Acid_4655 glycosyl transferase, group 1.
  
     0.627
Ppha_1002
PFAM: Radical SAM domain protein; KEGG: cph:Cpha266_1814 radical SAM domain protein.
 
     0.598
Ppha_1003
KEGG: cph:Cpha266_1815 hypothetical protein.
       0.597
Ppha_1019
KEGG: cph:Cpha266_1831 N-acetylmannosaminyltransferase; TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF; Belongs to the glycosyltransferase 26 family.
  
 
 0.528
Ppha_1001
PFAM: glycosyl transferase group 1; KEGG: cph:Cpha266_1812 glycosyl transferase, group 1.
 
    
0.520
Your Current Organism:
Pelodictyon phaeoclathratiforme
NCBI taxonomy Id: 324925
Other names: P. phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme BU-1, Pelodictyon phaeoclathratiforme DSM 5477, Pelodictyon phaeoclathratiforme str. BU-1, Pelodictyon phaeoclathratiforme strain BU-1
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